Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916418.1_cds_XP_016466130.1_59017
CDS Infomation

[gene=LOC107788909] [db_xref=GeneID:107788909] [protein=tRNA(His) guanylyltransferase 1-like] [protein_id=XP_016466130.1] [location=complement(join(39165..39317,39786..39890,41230..41315,41464..41633,42409..42453,42542..42673,43258..43514,44444..44551,45718..45803,45901..46070,47176..47220,47309..47404,47550..47653))] [gbkey=CDS]
Sequence

ATGGCCAACAGCAAGTATGAATACGTAAAGTGTTTTGAGGCGGAAGACGAAGTAATGTAC
CCAAATATCATTGTTGTTCAAATTGATGGCCGCGAATTTGGCAGAATGCTGATGTGGAAT
TATGTCGTGGTTCTTGTCAATTGNGTATTAGAGAACTTCTCTGATGTTATATTTGCATAT
GGATTTAGTGATGAGTACAGTTTCGTCTTGAAGAAGGAAACCACCTTTTACCAGAGGCGA
GCGAGCAAAATACTCTCCATTATTGTGTCTTTCTTCTCATCTACATTTGTAACCAAATGG
AAAGAGTTCTTTTCTCAAAAGGAGTTAAGTGTGCCTCCATCATTCCATTCACGAGTTATC
AGCTGTGCATCAATGGAGGTTCTTCAGGCATATCTTCTATGGAGACAAACAGAATGTCAT
ACAAGCAATCTATACAATACTTGTTTGTGGAAGCTGGTGTTTTCTGGAAAGTCAGAAAAA
GAGGCCAAAGAGATTCTTAAGGGAACACAAAAGCAGGAGAAAAATGAATTACTCTTTCAG
CAGTTTGGTATCAACTACAAGGACCTTCCACAGATTTTTCGTCAAGGGTCTTGTGCCATC
AAGATAAAGGTGGAAGATATTGTGAAATACCGAGAAAATGGCACTCCTGTTAAAAGACCA
AGGAAGAAAGCAGTCATAGTTCACTCCGAAAATATAGCAACAAAAGGCTTCTGGAAGAAC
TACTCATTCCTTACTGAGGAACTTGGTTTGCTTGCAGAAGGCATTAATAAGATTAAACCT
GAGTATTTGAGGTCTTTCCAATTTGAAAGCAAGCTGATGTTATCTACTTGGATTGTAGTC
CGGATAGACGGTTGTCATTTCCACAGGTTTTGTGAAGATAATGGTTTTCAGAAGCCAAAT
GATGAGCAGGCACTAAATCTTATGAACTCATGTGCGGTTTCTTTGCTAGAGATGTTTAAG
GATATTATCTTTGCATATGGGGTGAGCGATGAATATAGTTTTGTTTTGAAGAAAGGATCT
CTATTATATCAGAGGCGGTCAAGTGAAATCGTTTCTGCCATTGTATCTCTTTTCTCTTCC
ATGTATGTGATGAAGTGGAAAGAGTTTTTCCCTGAGAAAGAGTTTAAAGAACCACCTTAT
TTTGATGGTCGATGCGTTTGCTATCCATCATCTGAGATTCTTCGAGATTACTTGGCTTGG
AGACAAGTTGATTGTCACATAAACAATCAGTACAATACTTGTTTTTGGCTGCTTGTTAAG
TCTGGAAAGAGTAGAACTGAAGCGCAGAGCTCTCTGAAGGGTACCCAAACTCAGGAAAAG
AATGAATTGCTTGCCCAGTTTGGCATTGATTACAATGCGCTACCGATCATGTTTCGGATG
GGTTCCTCTGTTTTCCAGGACAAAGATGAACTAACTGGAAATGACAAAGTAGTTGTTGAA
CACTGTAATATAATTGACACGAGCTTTTGGAAAGAACATCCAAGAATACTTGACGAGGAG
GAGCCATTGCGGACGATTTTGCGGCCCCATAGCAATAAAATGCTTCGAGTGTCTTGA

Peptide Sequence

PEP ID

XP_016466130.1
PEP Infomation

PREDICTED: tRNA(His) guanylyltransferase 1-like [Nicotiana tabacum]
Sequence

MANSKYEYVKCFEAEDEVMYPNIIVVQIDGREFGRMLMWNYVVVLVNXVLENFSDVIFAY
GFSDEYSFVLKKETTFYQRRASKILSIIVSFFSSTFVTKWKEFFSQKELSVPPSFHSRVI
SCASMEVLQAYLLWRQTECHTSNLYNTCLWKLVFSGKSEKEAKEILKGTQKQEKNELLFQ
QFGINYKDLPQIFRQGSCAIKIKVEDIVKYRENGTPVKRPRKKAVIVHSENIATKGFWKN
YSFLTEELGLLAEGINKIKPEYLRSFQFESKLMLSTWIVVRIDGCHFHRFCEDNGFQKPN
DEQALNLMNSCAVSLLEMFKDIIFAYGVSDEYSFVLKKGSLLYQRRSSEIVSAIVSLFSS
MYVMKWKEFFPEKEFKEPPYFDGRCVCYPSSEILRDYLAWRQVDCHINNQYNTCFWLLVK
SGKSRTEAQSSLKGTQTQEKNELLAQFGIDYNALPIMFRMGSSVFQDKDELTGNDKVVVE
HCNIIDTSFWKEHPRILDEEEPLRTILRPHSNKMLRVS

Transcript Sequence

Gene sequence data has not been registered.